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October 2017
260.00£ - 510.00£

Ecological niche modelling using R (ENMR01)

16 October 2017 - 20 October 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

This course is being repeated March 12th - 16th at SCENE field station Course Overview: The course will cover the base theory of ecological niche modelling and its main methodologies. By the end of this 5-day practical course, attendees will have the capacity to perform ecological niche models and understand their results, as well as to choose and apply the correct methodology depending on the aim of their type of study and data. Ecological niche, species distribution, habitat distribution, or…

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Introduction to bioinformatics using Linux (IBUL02)

16 October 2017 - 20 October 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: Most high-throughput bioinformatics work these days takes place on the Linux command line. The programs which do the majority of the computational heavy lifting — genome assemblers, read mappers, and annotation tools — are designed to work best when used with a command-line interface. Because the command line can be an intimidating environment, many biologists learn the bare minimum needed to get their analysis tools working. This means that they miss out on the power of Linux to…

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260.00£ - 580.00£

Reproducible data science for population genetics (RDPG01)

23 October 2017 - 27 October 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: With the increasing availability of various types of genetic and genomic data, population genetics and molecular ecology are becoming largely data driven sciences. Understanding the evolutionary, demographic, and ecological underpinning the genetic makeup of natural populations now relies on a combination of exploratory approaches and models. This course will provide an in-depth introduction to these techniques, with a strong emphasis on reproducibility though the use of modern analytic practices and tools. After an introduction to phylogenetic reconstruction, the…

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260.00£ - 670.00£

Structural Equation Modelling for Ecologists and Evolutionary Biologists (SEMR01)

23 October 2017 - 27 October 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: The course is a primer on structural equation modelling (SEM) and confirmatory path analysis, with an emphasis on practical skills and applications to real-world data. Structural equation modelling is a rapidly growing technique in ecology and evolution that unites multiple hypotheses in a single causal network. It provides an intuitive graphical representation of relationships among variables, underpinned by well-described mathematical estimation procedures. Several advances in SEM over the past few years have expanded its utility for typical ecological…

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November 2017
260.00£ - 640.00£

Landscape genetic data analysis using R (LNDG02)

6 November 2017 - 10 November 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: The term ‘landscape genetics’ has been applied studies that integrate ecological context and intervening landscape into population genetic analyses of contemporary processes such as gene flow and migration.  This course will cover the basics of both quantitative landscape ecology and population genetics, focusing on how we develop and evaluate spatial/genetic analyses using the R platform. Intended Audience This course is suitable for graduate students, postdoctoral researchers, and primary investigators interested in learning how to integrate landscape ecological and…

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300.00£ - 600.00£

Applied Bayesian modelling for ecologists and epidemiologists (ABME03)

20 November 2017 - 25 November 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: This application-driven course will provide a founding in the basic theory & practice of Bayesian statistics, with a focus on MCMC modeling for ecological & epidemiological problems. Starting from a refresher on probability & likelihood, the course will take students all the way to cutting-edge applications such as state-space population modelling & spatial point-process modelling. By the end of the week, you should have a basic understanding of how common MCMC samplers work and how to program them,…

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Introduction to Python for biologists (IPYB04)

27 November 2017 - 1 December 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackle problems in their own research and (2) continue…

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Introduction to remote sensing and GIS for ecological applications (IRMS01)

27 November 2017 - 1 December 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: The course will deal with different aspects related to the use of remote sensing and GIS in spatial ecology by using the Free and Open Source Software GRASS GIS coupled with R. By the end of this 5-day practical course, attendees will have the capacity to deal with ecological patterns and processes by using GIS and remote sensing algorithms. The increasing availability of open ecological and geographical data through networks such as the Global Biodiversity Information Facility (GBIF,…

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December 2017
260.00£ - 550.00£

Advancing in statistical modelling for evolutionary biologists and ecologists using R (ADVR07)

4 December 2017 - 8 December 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: This course will provide an introduction to working with real-life data typical of those encountered in the field of evolutionary biology and ecology. The course will be delivered by Dr. Luc Bussiere, Dr. Tom Houslay and Dr. Ane Timenes Laugen who are all practicing academics in the field of evolutionary biology.  This five day course will consist of series of modules (each lasting roughly half a day) covering model selection and simplification, generalised linear models, mixed effects models,  and non-linear models. Along…

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January 2018
260.00£ - 560.00£

Phylogenetic data analysis using R (PHYL02)

28th January 2018 - 2nd February 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: The main objectives of the course are to teach the theoretical bases of phylogenetic analysis, and to give the ability to initiate a phylogenetic analysis starting from the files of molecular sequences until the interpretation of the results and the graphics. The introduction will cover a brief historical background and an overview of the different methods of phylogenetic inference. Different kinds of data will be considered, but with a special emphasis on DNA sequences. The software used will…

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260£ - 620£

Introduction to Bayesian hierarchical modelling using R (IBHM02)

29th January 2018 - 2nd February 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: This course will cover introductory hierarchical modelling for real-world data sets from a Bayesian perspective. These methods lie at the forefront of statistics research and are a vital tool in the scientist’s toolbox. The course focuses on introducing concepts and demonstrating good practice in hierarchical models. All methods are demonstrated with data sets which participants can run themselves. Participants will be taught how to fit hierarchical models using the Bayesian modelling software Jags and Stan through the R…

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February 2018
260.00£ - 500.00£

Geometric morphometrics using R (GMMR01)

19th February 2018 - 23rd February 2018
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course overview: The field of geometric morphometrics (GM) is concerned with the quantification and analysis of patterns of shape variation, and its covariation with other variables. Over the past several decades these approaches have become a mainstay in the field of ecology, evolutionary biology, and anthropology, and a panoply of analytical tools for addressing specific biological hypotheses concerning shape have been developed. The goal of this is to provide participants with a working knowledge of the theory of geometric morphometrics,…

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260.00£ - 620.00£

Movement ecology (MOVE01)

19th February 2018 - 23rd February 2018
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: The course will cover the concepts, technology and software tools that can be used to analyse movement data (from ringing/CMR to VHF/GPS to novel biologging data) in ecology and evolution, covering analysis techniques applicable broadly to most taxa, from micro-organisms to plants and animals. We will cover elementary and advanced analysis and modelling techniques broadly applicable across taxa, highlighting the advantages of a unified Movement Ecology framework. We will provide the necessary bases in ecology (especially behavioural ecology),…

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March 2018
260.00£ - 610.00£

Functional ecology from organism to ecosystem: theory and computation (FEER01)

5th March 2018 - 9th March 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: The course will describe different aspects and methods of functional ecology, from organisms to ecosystems, combining theoretical lessons with hands-on real data. Lectures will cover general aspects of functional ecology, including definitions, measurements and different applications of functional traits. They will include analysis of traits at organismal, community and ecosystem levels, including relationships to ecosystem function and ecological services, and use examples from land use change, climate change, and multi-trophic interactions. An overview of existing computational methods, including…

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260.00£ - 580.00£

Spatial Prioritization with Marxan (MRXN01)

5th March 2018 - 9th March 2018
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: Marxan (Ian Ball and Hugh Possingham, 2000) is a software program used to support the design of marine and terrestrial reserves.  Marxan is now used by over 6000 people in 150 countries, making it the most the most widely used conservation planning tool in the world. In simple terms, Marxan analyzes scientific and geographic data to help users allocate space in ways that maximize values such as biodiversity, land value, cultural significance, and economic productivity whilst minimizing cost.…

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260.00£ - 530.00£

Ecological niche modelling using R (ENMR02)

12th March 2018 - 16th March 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: The course will cover the base theory of ecological niche modelling and its main methodologies. By the end of this 5-day practical course, attendees will have the capacity to perform ecological niche models and understand their results, as well as to choose and apply the correct methodology depending on the aim of their type of study and data. Ecological niche, species distribution, habitat distribution, or climatic envelope models are different names for similar mechanistic or correlative models, empirical…

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April 2018
£260.00 - £580.00

Network analysis for ecologists using R (NTWA02)

9th April 2018 - 13th April 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course overview: The first graphical representation of a food web dates back to 1880, with the pioneering works of Lorenzo Camerano. Since then, research on ecological networks has further developed and ecology is one of the fields that contributed the most to the growth of network science. Nowadays, ecologists routinely apply network analysis with a diverse set of objectives that range from studying the stability of ecological communities to quantifying energy flows in ecosystems. The course is intended to provide…

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260.00£ - 620.00£

Multivariate analysis of ecological communities in R with the VEGAN package (VGNR01)

23rd April 2018 - 27th April 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: This 5-day course will cover the concepts, methods, and R tools that can be used to analyse community ecology data. The course will review data processing techniques relevant to multivariate data sets. We will cover diversity and null-model analysis, distance measures and distance based multivariate methods, clustering, classification, and dimension reduction techniques using the vegan R extension package. We will use real world data sets to motivate the analyses, e.g. describing patterns along environmental or anthropogenic disturbance gradients,…

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July 2018
260.00£ - 580.00£

Model base multivariate analysis of abundance data using R (MBMV02)

8th July 2018 - 12th July 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: This course will provide an introduction to modern multivariate techniques, with a special focus on the analysis of abundance or presence/absence data. Multivariate analysis in ecology has been changing rapidly in recent years, with a focus now on formulating a statistical model to capture key properties of the observed data, rather than transformation of data using a dissimilarity-based framework. In recent years, model-based techniques have been developed for hypothesis testing, identifying indicator species, ordination, clustering, predictive modelling, and…

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Eukaryotic metabarcoding (EUKB01)

23rd July 2018 - 27th July 2018
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: Metabarcoding techniques are a set of novel genetic tools for assessing biodiversity of natural communities. Their potential applications include (but are not limited to) accurate water quality, soil diversity assessment, trophic analyses of digestive contents, early detection of non-indigenous species, studies of global ecological patterns and biomonitoring of anthropogenic impacts. This course will give an overview of metabarcoding procedures with an emphasis on practical problem-solving and hands-on work using analysis pipelines on real datasets. After completing the course,…

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