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June 2017
£650.00 - £780.00

Multivariate analysis of spatial ecological data using R (MASE01)

19 June 2017 - 23 June 2017
Northwest Atlantic Fisheries Centre, St. John’s, 80 E White Hills Rd
St. John's, NL A1A 5J7 Canada

Course Overview: This 5-day course will cover the concepts, methods, and R tools that can be used to analyse spatial data in ecology. The start of the course will cover the basics of linear models and spatial data processing in R and provide a common ground for more advanced techniques encountered later on the course. We will cover spatial statistical techniques for both continuous and discrete data response types. We will put special emphasis on understanding mechanisms using visual tools, and…

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£575.00 - £690.00

Time series models for ecologists (TSME01)

26 June 2017 - 30 June 2017
Northwest Atlantic Fisheries Centre, St. John’s, 80 E White Hills Rd
St. John's, NL A1A 5J7 Canada

Course Overview: This course will cover time series analysis with a particular focus on applications in ecology. All methods will be illustrated using the free, open-source software package R. Time Series data are ubiquitous in the physical sciences, and models for their behaviour enable scientists to understand temporal dynamics and predict future values. Participants will be taught a wide range of suitable time series models for both discrete and continuous time systems. The course will cover a range of techniques…

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July 2017

Bioinformatics for geneticists and biologists (BIGB02)

3 July 2017 - 7 July 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course overview:  The handling of large datasets has become intractable without some level of bioinformatic literacy. Many biologists find that there is a steep learning curve to develop the confidence required to explore their genomics datasets effectively. This bioinformatics short course includes a rich collection of hands-on instruction and lectures specifically intended to help novice users become comfortable with a range of tools currently used to analyse next-generation data. To find out more or to book online via our sister…

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£260.00 - £650.00

Meta-analysis in ecology, evolution and environmental sciences (METR01)

24 July 2017 - 28 July 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course overview:  This 5-day course will involve combination of lectures and practical sessions where students will practice conducting meta-analysis using the metafor package in R. In addition, students will conduct their own mini-meta-analyses by working in small groups on an assigned ecological topic with 8-10 primary research papers provided per topic. Students would need to decide on effect size metric to use and inclusion criteria, extract the data from the primary studies, design the extraction spreadsheet, conduct meta-analysis using the…

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August 2017
£300.00 - £600.00

Spatial analysis of ecological data using R (SPAE05)

7 August 2017 - 12 August 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: The course will cover the concepts and R tools that can be used to analyse spatial data in ecology covering elementary and advanced spatial analysis techniques applicable to both plants and animals. We will investigate analyses appropriate to transect (e.g. line surveys, trapping arrays), grid (e.g. occupancy surveys) and point data (e.g. telemetry). The focal questions will be on deriving species distributions, determining their environmental drivers and quantifying different types of associated uncertainty. Novel methodology for generating predictions…

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October 2017
£260.00 - £510.00

Ecological niche modelling using R (ENMR01)

16 October 2017 - 20 October 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: The course will cover the base theory of ecological niche modelling and its main methodologies. By the end of this 5-day practical course, attendees will have the capacity to perform ecological niche models and understand their results, as well as to choose and apply the correct methodology depending on the aim of their type of study and data. Ecological niche, species distribution, habitat distribution, or climatic envelope models are different names for similar mechanistic or correlative models, empirical…

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Introduction to bioinformatics using Linux (IBUL02)

16 October 2017 - 20 October 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: Most high-throughput bioinformatics work these days takes place on the Linux command line. The programs which do the majority of the computational heavy lifting — genome assemblers, read mappers, and annotation tools — are designed to work best when used with a command-line interface. Because the command line can be an intimidating environment, many biologists learn the bare minimum needed to get their analysis tools working. This means that they miss out on the power of Linux to…

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£260.00 - £580.00

Genetic data analysis and exploration using R (GDAR03)

23 October 2017 - 27 October 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: This course provides a comprehensive introduction to exploratory statistical methods used in population genetics and molecular ecology. Participants will become proficient in a range of approaches for uncovering genetic structures from usual genetic data including most genetic markers (e.g. microsatellites, SNPs, AFLP) and genetic sequences (DNA or amino-acid). After covering different types of phylogenetic reconstruction, and basic population genetics tests, a strong emphasis will be put on using factorial methods (e.g. Principal Component Analysis) for investigating genetic diversity.…

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£260.00 - £670.00

Structural Equation Modelling for Ecologists and Evolutionary Biologists (SEMR01)

23 October 2017 - 27 October 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: The course is a primer on structural equation modelling (SEM) and confirmatory path analysis, with an emphasis on practical skills and applications to real-world data. Structural equation modelling is a rapidly growing technique in ecology and evolution that unites multiple hypotheses in a single causal network. It provides an intuitive graphical representation of relationships among variables, underpinned by well-described mathematical estimation procedures. Several advances in SEM over the past few years have expanded its utility for typical ecological…

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November 2017
£260.00 - £640.00

Landscape genetic data analysis using R (LNDG02)

6 November 2017 - 10 November 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: The term ‘landscape genetics’ has been applied studies that integrate ecological context and intervening landscape into population genetic analyses of contemporary processes such as gene flow and migration.  This course will cover the basics of both quantitative landscape ecology and population genetics, focusing on how we develop and evaluate spatial/genetic analyses using the R platform. Intended Audience This course is suitable for graduate students, postdoctoral researchers, and primary investigators interested in learning how to integrate landscape ecological and…

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£300.00 - £600.00

Applied Bayesian modelling for ecologists and epidemiologists (ABME03)

20 November 2017 - 25 November 2017
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: This application-driven course will provide a founding in the basic theory & practice of Bayesian statistics, with a focus on MCMC modeling for ecological & epidemiological problems. Starting from a refresher on probability & likelihood, the course will take students all the way to cutting-edge applications such as state-space population modelling & spatial point-process modelling. By the end of the week, you should have a basic understanding of how common MCMC samplers work and how to program them,…

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Introduction to Python for biologists (IPYB04)

27 November 2017 - 1 December 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackle problems in their own research and (2) continue…

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Introduction to remote sensing and GIS for ecological applications (IRMS01)

27 November 2017 - 1 December 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: The course will deal with different aspects related to the use of remote sensing and GIS in spatial ecology by using the Free and Open Source Software GRASS GIS coupled with R. By the end of this 5-day practical course, attendees will have the capacity to deal with ecological patterns and processes by using GIS and remote sensing algorithms. The increasing availability of open ecological and geographical data through networks such as the Global Biodiversity Information Facility (GBIF,…

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December 2017

Data visualisation and manipulation using Python (DVMP01)

4 December 2017 - 8 December 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course overview: One of the strengths of the Python language is the availability of mature, high-quality libraries for working with scientific data. Integration between the most popular libraries has lead to the concept of a "scientific Python stack": a collection of packages which are designed to work well together. In this workshop we will see how to leverage these libraries to efficiently work with and visualize large volumes of data. To find out more or to book online via our…

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£260.00 - £550.00

Advancing in statistical modelling for evolutionary biologists and ecologists using R (ADVR07)

4 December 2017 - 8 December 2017
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course Overview: This course will provide an introduction to working with real-life data typical of those encountered in the field of evolutionary biology and ecology. The course will be delivered by Dr. Luc Bussiere, Dr. Tom Houslay and Dr. Ane Timenes Laugen who are all practicing academics in the field of evolutionary biology.  This five day course will consist of series of modules (each lasting roughly half a day) covering model selection and simplification, generalised linear models, mixed effects models,  and non-linear models. Along…

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January 2018

Eukaryotic metabarcoding (EUKB01)

20th January 2018 - 24th January 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: Metabarcoding techniques are a set of novel genetic tools for assessing biodiversity of natural communities. Their potential applications include (but are not limited to) accurate water quality, soil diversity assessment, trophic analyses of digestive contents, early detection of non-indigenous species, studies of global ecological patterns and biomonitoring of anthropogenic impacts. This course will give an overview of metabarcoding procedures with an emphasis on practical problem-solving and hands-on work using analysis pipelines on real datasets. After completing the course,…

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£260 - £620

Introduction to Bayesian hierarchical modelling using R (IBHM02)

29th January 2018 - 2nd February 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: This course will cover introductory hierarchical modelling for real-world data sets from a Bayesian perspective. These methods lie at the forefront of statistics research and are a vital tool in the scientist’s toolbox. The course focuses on introducing concepts and demonstrating good practice in hierarchical models. All methods are demonstrated with data sets which participants can run themselves. Participants will be taught how to fit hierarchical models using the Bayesian modelling software Jags and Stan through the R…

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February 2018
£260.00 - £600.00

Geometric morphometrics using R (GMMR01)

19th February 2018 - 23rd February 2018
Margam Discovery Centre, Magram Park
Port Talbot , SA13 2UA United Kingdom

Course overview: The field of geometric morphometrics (GM) is concerned with the quantification and analysis of patterns of shape variation, and its covariation with other variables. Over the past several decades these approaches have become a mainstay in the field of ecology, evolutionary biology, and anthropology, and a panoply of analytical tools for addressing specific biological hypotheses concerning shape have been developed. The goal of this is to provide participants with a working knowledge of the theory of geometric morphometrics,…

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March 2018
£260.00 - £610.00

Functional ecology from organism to ecosystem: theory and computation (FEER01)

5th March 2018 - 9th March 2018
SCENE, Loch Lomond, Rowardennan,
Glasgow, Scotland, G63 0AW, United Kingdom

Course Overview: The course will describe different aspects and methods of functional ecology, from organisms to ecosystems, combining theoretical lessons with hands-on real data. Lectures will cover general aspects of functional ecology, including definitions, measurements and different applications of functional traits. They will include analysis of traits at organismal, community and ecosystem levels, including relationships to ecosystem function and ecological services, and use examples from land use change, climate change, and multi-trophic interactions. An overview of existing computational methods, including…

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